reference

License	Apache 2.0
GroupId	org.hammerlab.genomics
ArtifactId	reference_2.11
Last Version	1.5.0
Release Date	Jun 17, 2018
Type	jar
Description	reference reference
Project URL	https://github.com/hammerlab/genomic-reference
Project Organization	org.hammerlab.genomics
Source Code Management	https://github.com/hammerlab/genomic-reference

Download reference_2.11

Filename	Size
reference_2.11-1.5.0.pom
reference_2.11-1.5.0.jar	87 KB
reference_2.11-1.5.0-tests.jar	81 KB
reference_2.11-1.5.0-tests-sources.jar	5 KB
reference_2.11-1.5.0-tests-javadoc.jar	452 KB
reference_2.11-1.5.0-sources.jar	7 KB
reference_2.11-1.5.0-javadoc.jar	445 KB

How to add to project

Apache Maven

<!-- https://jarcasting.com/artifacts/org.hammerlab.genomics/reference_2.11/ -->
<dependency>
    <groupId>org.hammerlab.genomics</groupId>
    <artifactId>reference_2.11</artifactId>
    <version>1.5.0</version>
</dependency>

Gradle Groovy

// https://jarcasting.com/artifacts/org.hammerlab.genomics/reference_2.11/
implementation 'org.hammerlab.genomics:reference_2.11:1.5.0'

Gradle Kotlin

// https://jarcasting.com/artifacts/org.hammerlab.genomics/reference_2.11/
implementation ("org.hammerlab.genomics:reference_2.11:1.5.0")

Apache Buildr

'org.hammerlab.genomics:reference_2.11:jar:1.5.0'

Apache Ivy

<dependency org="org.hammerlab.genomics" name="reference_2.11" rev="1.5.0">
  <artifact name="reference_2.11" type="jar" />
</dependency>

Groovy Grape

@Grapes(
@Grab(group='org.hammerlab.genomics', module='reference_2.11', version='1.5.0')
)

Scala SBT

libraryDependencies += "org.hammerlab.genomics" % "reference_2.11" % "1.5.0"

Leiningen

[org.hammerlab.genomics/reference_2.11 "1.5.0"]

Dependencies

compile (5)

Group / Artifact	Type	Version
org.scala-lang : scala-library	jar	2.11.12
org.scala-lang : scala-reflect	jar	2.11.12
org.hammerlab.genomics : utils_2.11	jar	1.3.2
org.hammerlab : iterator_2.11	jar	2.2.0
com.esotericsoftware.kryo : kryo	jar	2.24.0

provided (2)

Group / Artifact	Type	Version
org.apache.spark : spark-core_2.11	jar	2.2.1
org.apache.hadoop : hadoop-client	jar	2.7.3

test (4)

Group / Artifact	Type	Version
org.scalatest : scalatest_2.11	jar	3.0.4
org.hammerlab.test : base_2.11	jar	1.0.1
org.hammerlab.macros : conversions_2.11	jar	1.0.0
org.hammerlab : spark-tests_2.11	jar	2.3.3

Project Modules

There are no modules declared in this project.

genomic-reference

Utilities for representing and working with reference genomes.

Contains type-aliases and classes representing reference loci, contig names, and intervals (with and without contigs attached).

The former use Scala value-classes to obtain a measure of type-safety without run-time overhead.

Hammer Lab

We're a lab working to understand and improve the immune response to cancer

Versions

Version
1.5.0 Jun 17, 2018
1.4.3 Mar 14, 2018
1.4.2 Jan 22, 2018
1.4.1 Jan 18, 2018
1.4.0 Aug 6, 2017
1.3.0 Jun 20, 2017
1.2.4 Apr 6, 2017
1.2.3 Apr 3, 2017
1.2.2 Mar 13, 2017
1.2.1 Feb 5, 2017
1.2.0 Feb 5, 2017
1.1.0 Jan 2, 2017
1.0.1 Dec 10, 2016
1.0.0 Dec 10, 2016