Hadoop-BAM

A Java library for the manipulation of files in common bioinformatics formats using the Hadoop MapReduce framework.

License	MIT-License
GroupId	org.seqdoop
ArtifactId	hadoop-bam
Last Version	7.10.0
Release Date	Apr 23, 2018
Type	jar
Description	Hadoop-BAM A Java library for the manipulation of files in common bioinformatics formats using the Hadoop MapReduce framework.
Project URL	http://sourceforge.net/projects/hadoop-bam/

Download hadoop-bam

Filename	Size
hadoop-bam-7.10.0.pom
hadoop-bam-7.10.0.jar	290 KB
hadoop-bam-7.10.0-tests.jar	33 KB
hadoop-bam-7.10.0-sources.jar	207 KB
hadoop-bam-7.10.0-javadoc.jar	600 KB

How to add to project

Apache Maven

<!-- https://jarcasting.com/artifacts/org.seqdoop/hadoop-bam/ -->
<dependency>
    <groupId>org.seqdoop</groupId>
    <artifactId>hadoop-bam</artifactId>
    <version>7.10.0</version>
</dependency>

Gradle Groovy

// https://jarcasting.com/artifacts/org.seqdoop/hadoop-bam/
implementation 'org.seqdoop:hadoop-bam:7.10.0'

Gradle Kotlin

// https://jarcasting.com/artifacts/org.seqdoop/hadoop-bam/
implementation ("org.seqdoop:hadoop-bam:7.10.0")

Apache Buildr

'org.seqdoop:hadoop-bam:jar:7.10.0'

Apache Ivy

<dependency org="org.seqdoop" name="hadoop-bam" rev="7.10.0">
  <artifact name="hadoop-bam" type="jar" />
</dependency>

Groovy Grape

@Grapes(
@Grab(group='org.seqdoop', module='hadoop-bam', version='7.10.0')
)

Scala SBT

libraryDependencies += "org.seqdoop" % "hadoop-bam" % "7.10.0"

Leiningen

[org.seqdoop/hadoop-bam "7.10.0"]

Dependencies

compile (4)

Group / Artifact	Type	Version
org.apache.hadoop : hadoop-client	jar	2.2.0
com.github.samtools : htsjdk	jar	2.13.2
com.github.jsr203hadoop : jsr203hadoop	jar	1.0.3
org.slf4j : slf4j-api	jar	1.7.25

provided (1)

Group / Artifact	Type	Version
com.intel.gkl : gkl	jar	0.8.1

test (5)

Group / Artifact	Type	Version
junit : junit	jar	4.12
org.mockito : mockito-all	jar	1.10.19
org.apache.hadoop : hadoop-common	jar	2.2.0
org.apache.hadoop : hadoop-hdfs	jar	2.2.0
org.slf4j : slf4j-log4j12	jar	1.7.25

Project Modules

There are no modules declared in this project.

Versions

Version
7.10.0 Apr 23, 2018
7.9.2 Mar 5, 2018
7.9.1 Dec 18, 2017
7.9.0 Sep 6, 2017
7.8.0 Feb 23, 2017
7.7.1 Nov 3, 2016
7.7.0 Sep 9, 2016
7.6.0 Jun 30, 2016
7.5.0 May 18, 2016
7.4.0 Feb 14, 2016
7.3.1 Jan 20, 2016
7.3.0 Nov 19, 2015
7.2.1 Oct 25, 2015
7.2.0 Oct 14, 2015
7.1.1 Oct 11, 2015
7.1.0 Jun 14, 2015
7.0.0 Sep 9, 2014