InterProScan

InterProScan is the software package that allows sequences (protein and nucleic) to be scanned against InterPro's signatures.

License	The Apache Software License, Version 2.0
GroupId	uk.ac.ebi.interpro.scan
ArtifactId	interproscan
Last Version	5.36-75.0
Release Date	Jul 15, 2019
Type	pom
Description	InterProScan InterProScan is the software package that allows sequences (protein and nucleic) to be scanned against InterPro's signatures.
Project URL	http://www.ebi.ac.uk/interpro/
Project Organization	European Bioinformatics Institute
Source Code Management	https://github.com/ebi-pf-team/interproscan.git

Download interproscan

Filename	Size
interproscan-5.36-75.0.pom	16 KB

How to add to project

Apache Maven

<!-- https://jarcasting.com/artifacts/uk.ac.ebi.interpro.scan/interproscan/ -->
<dependency>
    <groupId>uk.ac.ebi.interpro.scan</groupId>
    <artifactId>interproscan</artifactId>
    <version>5.36-75.0</version>
    <type>pom</type>
</dependency>

Gradle Groovy

// https://jarcasting.com/artifacts/uk.ac.ebi.interpro.scan/interproscan/
implementation 'uk.ac.ebi.interpro.scan:interproscan:5.36-75.0'

Gradle Kotlin

// https://jarcasting.com/artifacts/uk.ac.ebi.interpro.scan/interproscan/
implementation ("uk.ac.ebi.interpro.scan:interproscan:5.36-75.0")

Apache Buildr

'uk.ac.ebi.interpro.scan:interproscan:pom:5.36-75.0'

Apache Ivy

<dependency org="uk.ac.ebi.interpro.scan" name="interproscan" rev="5.36-75.0">
  <artifact name="interproscan" type="pom" />
</dependency>

Groovy Grape

@Grapes(
@Grab(group='uk.ac.ebi.interpro.scan', module='interproscan', version='5.36-75.0')
)

Scala SBT

libraryDependencies += "uk.ac.ebi.interpro.scan" % "interproscan" % "5.36-75.0"

Leiningen

[uk.ac.ebi.interpro.scan/interproscan "5.36-75.0"]

Dependencies

compile (10)

Group / Artifact	Type	Version
log4j : log4j	jar	1.2.14
org.slf4j : slf4j-log4j12	jar	1.7.13
commons-logging : commons-logging	jar	1.1.1
org.springframework : spring-jdbc	jar	4.2.2.RELEASE
org.springframework : spring-context	jar	4.2.2.RELEASE
org.springframework : spring-core	jar	4.2.2.RELEASE
org.springframework : spring-orm	jar	4.2.2.RELEASE
org.springframework : spring-test	jar	4.2.2.RELEASE
commons-io : commons-io	jar	2.1
joda-time : joda-time	jar	2.1

test (1)

Group / Artifact	Type	Version
junit : junit	jar	4.12

Project Modules

• util
• generic-jpa-dao
• model
• io
• persistence
• business
• web
• management
• jms-implementation
• precalcmatches

interproscan

What is InterProScan?

InterPro is a database which integrates together predictive information about proteins' function from a number of partner resources, giving an overview of the families that a protein belongs to and the domains and sites it contains.

Users who have novel nucleotide or protein sequences that they wish to functionally characterise can use the software package InterProScan to run the scanning algorithms from the InterPro database in an integrated way. Sequences are submitted in FASTA format. Matches are then calculated against all of the required member database's signatures and the results are then output in a variety of formats.

Documentation

For more information on downloading, installing and running InterProScan please see the InterProScan readthedocs.

Contact us

For further assistance please contact us.

Versions

Version
5.36-75.0 Jul 15, 2019
5.35-74.0 May 15, 2019
5.34-73.0 Mar 28, 2019
5.33-72.0 Jan 18, 2019
5.32-71.0 Nov 12, 2018
5.31-70.0 Sep 25, 2018
5.30-69.0 Jun 22, 2018
5.29-68.0 May 3, 2018
5.28-67.0 Mar 2, 2018
5.27-66.0 Nov 24, 2017
5.26-65.0 Oct 16, 2017
5.25-64.0 Jul 6, 2017
5.24-63.0 May 11, 2017
5.23-62.0 Mar 17, 2017
5.22-61.0 Jan 24, 2017
5.21-60.0 Dec 13, 2016
5.19-58.0 Jun 23, 2016