JCoRe Medline Reader

Leveraging the JCoRe XML Reader, this project employs a Medline-enabled mapping file to map Medline XML documents to CAS instances. The input is a directory of single XML files, each containing exactly one XML MedlineCitation. The XML format is the one used by NCBI when downloading Medline documents in large batches from the NCBI FTP server. However, the component currently expects single documents instead of whole MedlineCitationSets containing sets of MedlineCitations.

License	BSD-2-Clause
GroupId	de.julielab
ArtifactId	jcore-medline-reader
Last Version	2.5.1
Release Date	Mar 29, 2021
Type	jar
Description	JCoRe Medline Reader Leveraging the JCoRe XML Reader, this project employs a Medline-enabled mapping file to map Medline XML documents to CAS instances. The input is a directory of single XML files, each containing exactly one XML MedlineCitation. The XML format is the one used by NCBI when downloading Medline documents in large batches from the NCBI FTP server. However, the component currently expects single documents instead of whole MedlineCitationSets containing sets of MedlineCitations.
Project URL	https://github.com/JULIELab/jcore-projects/tree/master/jcore-medline-reader
Project Organization	JULIE Lab, Germany

Download jcore-medline-reader

Filename	Size
jcore-medline-reader-2.5.1.pom
jcore-medline-reader-2.5.1.jar	11 KB
jcore-medline-reader-2.5.1-sources.jar	11 KB

How to add to project

Apache Maven

<!-- https://jarcasting.com/artifacts/de.julielab/jcore-medline-reader/ -->
<dependency>
    <groupId>de.julielab</groupId>
    <artifactId>jcore-medline-reader</artifactId>
    <version>2.5.1</version>
</dependency>

Gradle Groovy

// https://jarcasting.com/artifacts/de.julielab/jcore-medline-reader/
implementation 'de.julielab:jcore-medline-reader:2.5.1'

Gradle Kotlin

// https://jarcasting.com/artifacts/de.julielab/jcore-medline-reader/
implementation ("de.julielab:jcore-medline-reader:2.5.1")

Apache Buildr

'de.julielab:jcore-medline-reader:jar:2.5.1'

Apache Ivy

<dependency org="de.julielab" name="jcore-medline-reader" rev="2.5.1">
  <artifact name="jcore-medline-reader" type="jar" />
</dependency>

Groovy Grape

@Grapes(
@Grab(group='de.julielab', module='jcore-medline-reader', version='2.5.1')
)

Scala SBT

libraryDependencies += "de.julielab" % "jcore-medline-reader" % "2.5.1"

Leiningen

[de.julielab/jcore-medline-reader "2.5.1"]

Dependencies

compile (3)

Group / Artifact	Type	Version
de.julielab : jcore-xml-reader	jar	2.5.0
org.apache.uima : uimaj-core	jar	2.10.4
org.apache.uima : uimafit-core	jar	2.5.0

provided (1)

Group / Artifact	Type	Version
de.julielab : jcore-descriptor-creator	jar	2.5.1

test (3)

Group / Artifact	Type	Version
junit : junit	jar	4.13
de.julielab : jcore-types	jar	2.5.0
ch.qos.logback : logback-classic	jar	1.2.3

Project Modules

There are no modules declared in this project.

JULIE Lab

Friedrich Schiller University's department of computational linguistics

Versions

Version
2.5.1 Mar 29, 2021
2.5.0 May 13, 2020
2.4.0 Mar 29, 2019
2.3.10 Jan 3, 2019
2.3.8 Dec 31, 2018
2.2.0 Sep 23, 2016
2.1.0 May 10, 2016
2.0.1 Nov 23, 2015