hadoop-bam

A Java library for the manipulation of files in common bioinformatics formats using the Hadoop MapReduce framework.

License	MIT-License
GroupId	org.hammerlab
ArtifactId	hadoop-bam
Last Version	7.9.0
Release Date	Aug 7, 2017
Type	jar
Description	hadoop-bam A Java library for the manipulation of files in common bioinformatics formats using the Hadoop MapReduce framework.
Project URL	http://sourceforge.net/projects/hadoop-bam/

Download hadoop-bam

Filename	Size
hadoop-bam-7.9.0.pom
hadoop-bam-7.9.0.jar	205 KB
hadoop-bam-7.9.0-tests.jar	4 MB
hadoop-bam-7.9.0-sources.jar	168 KB
hadoop-bam-7.9.0-javadoc.jar	473 KB

How to add to project

Apache Maven

<!-- https://jarcasting.com/artifacts/org.hammerlab/hadoop-bam/ -->
<dependency>
    <groupId>org.hammerlab</groupId>
    <artifactId>hadoop-bam</artifactId>
    <version>7.9.0</version>
</dependency>

Gradle Groovy

// https://jarcasting.com/artifacts/org.hammerlab/hadoop-bam/
implementation 'org.hammerlab:hadoop-bam:7.9.0'

Gradle Kotlin

// https://jarcasting.com/artifacts/org.hammerlab/hadoop-bam/
implementation ("org.hammerlab:hadoop-bam:7.9.0")

Apache Buildr

'org.hammerlab:hadoop-bam:jar:7.9.0'

Apache Ivy

<dependency org="org.hammerlab" name="hadoop-bam" rev="7.9.0">
  <artifact name="hadoop-bam" type="jar" />
</dependency>

Groovy Grape

@Grapes(
@Grab(group='org.hammerlab', module='hadoop-bam', version='7.9.0')
)

Scala SBT

libraryDependencies += "org.hammerlab" % "hadoop-bam" % "7.9.0"

Leiningen

[org.hammerlab/hadoop-bam "7.9.0"]

Dependencies

compile (4)

Group / Artifact	Type	Version
org.apache.hadoop : hadoop-client	jar	2.2.0
com.github.samtools : htsjdk	jar	2.9.1
com.github.jsr203hadoop : jsr203hadoop	jar	1.0.3
org.slf4j : slf4j-log4j12	jar	1.7.25

test (4)

Group / Artifact	Type	Version
junit : junit	jar	4.12
org.mockito : mockito-all	jar	1.10.19
org.apache.hadoop : hadoop-common	jar	2.2.0
org.apache.hadoop : hadoop-hdfs	jar	2.2.0

Project Modules

There are no modules declared in this project.

Versions

Version
7.9.0 Aug 7, 2017