GATK4 4.2.6.1

Development on GATK 4

License	Apache 2.0
GroupId	org.broadinstitute
ArtifactId	gatk
Version	4.2.6.1
Type	pom.sha512
Description	GATK4 Development on GATK 4
Project URL	http://github.com/broadinstitute/gatk

Download gatk 4.2.6.1

Filename	Size
gatk-4.2.6.1.pom
gatk-4.2.6.1-sources.jar	43 MB
gatk-4.2.6.1-javadoc.jar	10 MB

Dependencies

runtime (53)

Group / Artifact	Type	Version
org.broadinstitute : barclay	jar	4.0.2
org.aeonbits.owner : owner	jar	1.0.9
com.github.broadinstitute : picard	jar	2.27.1
org.genomicsdb : genomicsdb	jar	1.4.3
com.opencsv : opencsv	jar	3.4
com.google.guava : guava	jar	31.0.1-jre
com.github.samtools : htsjdk	jar	2.24.1
com.google.cloud : google-cloud-nio	jar	0.123.25
com.google.cloud : google-cloud-bigquery	jar	2.9.0
com.google.cloud : google-cloud-bigquerystorage	jar	2.9.1
gov.nist.math.jama : gov.nist.math.jama	jar	1.1.1
com.google.cloud.bigdataoss : gcs-connector	jar	1.9.4-hadoop3
org.apache.logging.log4j : log4j-api	jar	2.17.1
org.apache.logging.log4j : log4j-core	jar	2.17.1
org.apache.logging.log4j : log4j-jcl	jar	2.17.1
org.apache.commons : commons-lang3	jar	3.5
org.apache.commons : commons-math3	jar	3.5
org.apache.commons : commons-collections4	jar	4.1
org.apache.commons : commons-vfs2	jar	2.0
org.apache.commons : commons-configuration2	jar	2.4
org.apache.httpcomponents : httpclient	jar	4.5.12
commons-beanutils : commons-beanutils	jar	1.9.3
commons-io : commons-io	jar	2.5
org.reflections : reflections	jar	0.9.10
it.unimi.dsi : fastutil	jar	7.0.6
org.broadinstitute : hdf5-java-bindings	jar	1.1.0-hdf5_2.11.0
org.broadinstitute : gatk-native-bindings	jar	1.0.0
org.ojalgo : ojalgo	jar	44.0.0
org.ojalgo : ojalgo-commons-math3	jar	1.0.0
org.apache.spark : spark-mllib_2.11	jar	2.4.5
com.thoughtworks.paranamer : paranamer	jar	2.8
org.bdgenomics.bdg-formats : bdg-formats	jar	0.5.0
org.bdgenomics.adam : adam-core-spark2_2.11	jar	0.28.0
org.jgrapht : jgrapht-core	jar	0.9.1
org.disq-bio : disq	jar	0.3.6
org.apache.hadoop : hadoop-client	jar	3.2.1
com.github.jsr203hadoop : jsr203hadoop	jar	1.0.3
de.javakaffee : kryo-serializers	jar	0.41
org.objenesis : objenesis	jar	1.2
com.github.fommil.netlib : netlib-native_ref-osx-x86_64	jar	1.1
com.github.fommil.netlib : netlib-native_ref-linux-x86_64	jar	1.1
com.github.fommil.netlib : netlib-native_system-linux-x86_64	jar	1.1
com.github.fommil.netlib : netlib-native_system-osx-x86_64	jar	1.1
com.esotericsoftware : kryo	jar	3.0.3
com.esotericsoftware : reflectasm	jar	1.10.0
com.intel.gkl : gkl	jar	0.8.8
org.broadinstitute : gatk-bwamem-jni	jar	1.0.4
org.broadinstitute : gatk-fermilite-jni	jar	1.2.0
org.broadinstitute : http-nio	jar	0.1.0-rc1
org.xerial : sqlite-jdbc	jar	3.36.0.3
biz.k11i » xgboost-predictor	jar	0.3.0
net.grey-panther : natural-comparator	jar	1.1
com.fasterxml.jackson.module : jackson-module-scala_2.11	jar	2.9.8

Project Modules

There are no modules declared in this project.